BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022B02SP1|AL427858
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1066 1878 0.0
>3x_Contig1066
Length = 4816
Score = 1878 bits (944), Expect = 0.0
Identities = 958/964 (99%), Gaps = 1/964 (0%)
Strand = Plus / Minus
Query: 1 attcccgtgagawaatgaatgttataaactatgtagcgtttgcaatttatagaaaagawa 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3062 attcccgtgagaaaatgaatgttataaactatgtagcgtttgcaatttatagaaaagaaa 3003
Query: 61 tgcatgaaaaggaaatcaattgaggaaccctttgcaagatggtgcaccacagagacatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3002 tgcatgaaaaggaaatcaattgaggaaccctttgcaagatggtgcaccacagagacatgg 2943
Query: 121 taatytttcaccttcatcagtttccctttcaaacttataatcgtacgttagttcttcatt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2942 taatctttcaccttcatcagtttccctttcaaacttataatcgtacgttagttcttcatt 2883
Query: 181 ggtaccaatatcacgtaacgcgtaaatkacgatcctctttcggccatcgactttgatgat 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2882 ggtaccaatatcacgtaacgcgtaaatgacgatcctctttcggccatcgactttgatgat 2823
Query: 241 ttttgccgtacaactaggttcacaacagtgattaataaacctagcgataccacccctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2822 ttttgccgtacaactaggttcacaacagtgattaataaacctagcgataccacccctctt 2763
Query: 301 tgtagcatctataactgtattttcatcaattctgaataaataacttgaaccaattccaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2762 tgtagcatctataactgtattttcatcaattctgaataaataacttgaaccaattccaga 2703
Query: 361 cttgatatatctcttctctctcatttcagcgaccggttgtctaattgattcgccaacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2702 cttgatatatctcttctctctcatttcagcgaccggttgtctaattgattcgccaacata 2643
Query: 421 ctcaataatcatttccttggctgctataggttccaatgcatataggccccaattgtgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2642 ctcaataatcatttccttggctgctataggttccaatgcatataggccccaattgtgaat 2583
Query: 481 tgcagatcttgcaaaagtgacgggtttctttcttttcgttaattggtttaatgataatag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2582 tgcagatcttgcaaaagtgacgggtttctttcttttcgttaattggtttaatgataatag 2523
Query: 541 gtcagattcaaagccaattgcagctctttgcgcttctatatcttgctggaaacgtctttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2522 gtcagattcaaagccaattgcagctctttgcgcttctatatcttgctggaaacgtctttg 2463
Query: 601 gaaaactctgttcaaacgtgaggatgcattatggttatcttgctctaagtcagcctcttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2462 gaaaactctgttcaaacgtgaggatgcattatggttatcttgctctaagtcagcctcttg 2403
Query: 661 atttgttgattctgttccattcaaagccatgaaattctgttcttgatgattatgaacagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2402 atttgttgattctgttccattcaaagccatgaaattctgttcttgatgattatgaacagt 2343
Query: 721 gttcaaaggttgcgccaacctccgatgatgaagaaggtatgaagatttcagtttatcagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2342 gttcaaaggttgcgccaacctccgatgatgaagaaggtatgaagatttcagtttatcagg 2283
Query: 781 aattttcttaaagccatcagcaataaaactaccagtcgttgaagctaacgttgaatcaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2282 aattttcttaaagccatcagcaataaaactaccagtcgttgaagctaacgttgaatcaaa 2223
Query: 841 ttctttttcattcaaagctatttggttatcccgaataattccattttgttcaatctgttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2222 ttctttttcattcaaagctatttggttatcccgaataattccattttgttcaatctgttg 2163
Query: 901 gtataacttccacattgagtacggc-aaaattgtgtataatcagtagtaatatcttttga 959
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 2162 gtataacttccacattgagtacggcaaaaatggtgtataatcagtagtaatatcttttga 2103
Query: 960 tttt 963
||||
Sbjct: 2102 tttt 2099
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8733
Number of Sequences: 1807
Number of extensions: 8733
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)